The current version of PhyloNet is 3.8.2.  

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  • Citation
    • If you use PhyloNet, please cite
      • D. Wen, Y. Yu, J. Zhu, L. Nakhleh (2018) Inferring phylogenetic networks using PhyloNet, Systematic Biology 67(4): 735-740.
      • C. Than, D. Ruths, L. Nakhleh (2008) PhyloNet: A software package for analyzing and reconstructing reticulate evolutionary histories, BMC Bioinformatics 9:322.
      • as well as other the publications relevant to the method being used.
  • If you use PhyloNet, please take a moment to register.
  • Funding:
    • Development of the various functionalities in PhyloNet has been generously supported by DOE (DE-FG02-06ER25734), NIH (R01LM009494), and NSF (CCF-0622037, DBI-1062463, CCF-1302179, CCF-1514177) grants and Sloan and Guggenheim fellowships to Luay Nakhleh.