Y. Yu, Warnow, T., and Nakhleh, L.,
“Algorithms for MDC-based multi-locus phylogeny inference”,
The 15th Annual International Conference on Research in Computational Molecular Biology (RECOMB), vol. LNBI 6577. Lecture Notes in Bioinformatics, pp. 531-545, 2011.
YuWarnowNakhleh-RECOMB11.pdf (369.65 KB) R. A. L. Elworth, Allen, C., Benedict, T., Dulworth, P., and Nakhleh, L.,
“DGEN: A Test Statistic for Detection of General Introgression Scenarios”,
Workshop on Algorithms in Bioinformatics (WABI), vol. LIPIcs 19. pp. 19:1 - 19:13, 2018.
dgen.pdf (547.19 KB) Y. Yu and Nakhleh, L.,
“A Distance-based Method for Inferring Phylogenetic Networks in the Presence of Incomplete Lineage Sorting”,
International Symposium on Bioinformatics Research and Applications (ISBRA), vol. Lecture Notes in Bioinformatics 9096. pp. 378-389, 2015.
YuNakhleh-ISBRA15.pdf (327.21 KB) H. J. Park and Nakhleh, L.,
“MURPAR: A fast heuristic for inferring parsimonious phylogenetic networks from multiple gene trees”,
The 8th International Symposium on Bioinformatics Research and Applications (ISBRA), vol. LNBI 7292. pp. 213-224, 2012.
ParkNakhleh.pdf (289.57 KB)